TY - JOUR
T1 - Automated Nuclear Morphometry: A Deep Learning Approach for Prognostication in Canine Pulmonary Carcinoma to Enhance Reproducibility
AU - Glahn, Imaine
AU - Haghofer, Andreas
AU - Donovan, Taryn A.
AU - Degasperi, Brigitte
AU - Bartel, Alexander
AU - Kreilmeier-Berger, Theresa
AU - Hyndman, Philip S
AU - Janout, Hannah
AU - Assenmacher, Charles-Antoine
AU - Bartenschlager, Florian
AU - Bolfa, Pompei
AU - Dark, Michael J.
AU - Klang, Andrea
AU - Klopfleisch, Robert
AU - Merz, Sophie
AU - Richter, Barbara
AU - Schulman, F. Yvonne
AU - Ganz, Jonathan
AU - Scharinger, Josef
AU - Aubreville, Marc
AU - Winkler, Stephan
AU - Bertram, Christof A.
N1 - Publisher Copyright:
© 2024 by the authors.
PY - 2024
Y1 - 2024
N2 - The integration of deep learning-based tools into diagnostic workflows is increasingly prevalent due to their efficiency and reproducibility in various settings. We investigated the utility of automated nuclear morphometry for assessing nuclear pleomorphism (NP), a criterion of malignancy in the current grading system in canine pulmonary carcinoma (cPC), and its prognostic implications. We developed a deep learning-based algorithm for evaluating NP (variation in size, i.e., anisokaryosis and/or shape) using a segmentation model. Its performance was evaluated on 46 cPC cases with comprehensive follow-up data regarding its accuracy in nuclear segmentation and its prognostic ability. Its assessment of NP was compared to manual morphometry and established prognostic tests (pathologists’ NP estimates (n = 11), mitotic count, histological grading, and TNM-stage). The standard deviation (SD) of the nuclear area, indicative of anisokaryosis, exhibited good discriminatory ability for tumor-specific survival, with an area under the curve (AUC) of 0.80 and a hazard ratio (HR) of 3.38. The algorithm achieved values comparable to manual morphometry. In contrast, the pathologists’ estimates of anisokaryosis resulted in HR values ranging from 0.86 to 34.8, with slight inter-observer reproducibility (k = 0.204). Other conventional tests had no significant prognostic value in our study cohort. Fully automated morphometry promises a time-efficient and reproducible assessment of NP with a high prognostic value. Further refinement of the algorithm, particularly to address undersegmentation, and application to a larger study population are required.
AB - The integration of deep learning-based tools into diagnostic workflows is increasingly prevalent due to their efficiency and reproducibility in various settings. We investigated the utility of automated nuclear morphometry for assessing nuclear pleomorphism (NP), a criterion of malignancy in the current grading system in canine pulmonary carcinoma (cPC), and its prognostic implications. We developed a deep learning-based algorithm for evaluating NP (variation in size, i.e., anisokaryosis and/or shape) using a segmentation model. Its performance was evaluated on 46 cPC cases with comprehensive follow-up data regarding its accuracy in nuclear segmentation and its prognostic ability. Its assessment of NP was compared to manual morphometry and established prognostic tests (pathologists’ NP estimates (n = 11), mitotic count, histological grading, and TNM-stage). The standard deviation (SD) of the nuclear area, indicative of anisokaryosis, exhibited good discriminatory ability for tumor-specific survival, with an area under the curve (AUC) of 0.80 and a hazard ratio (HR) of 3.38. The algorithm achieved values comparable to manual morphometry. In contrast, the pathologists’ estimates of anisokaryosis resulted in HR values ranging from 0.86 to 34.8, with slight inter-observer reproducibility (k = 0.204). Other conventional tests had no significant prognostic value in our study cohort. Fully automated morphometry promises a time-efficient and reproducible assessment of NP with a high prognostic value. Further refinement of the algorithm, particularly to address undersegmentation, and application to a larger study population are required.
KW - anisokaryosis
KW - artificial intelligence
KW - dog
KW - image processing
KW - mitotic count
KW - nuclear pleomorphism
KW - prognosis
KW - pulmonary carcinoma
UR - https://www.scopus.com/pages/publications/85197913042
U2 - 10.3390/vetsci11060278
DO - 10.3390/vetsci11060278
M3 - Article
C2 - 38922025
SN - 2306-7381
VL - 11
JO - Veterinary Sciences
JF - Veterinary Sciences
IS - 6
M1 - 278
ER -