@inproceedings{01a64768c41649df864f89d596817d4f,
title = "PySpot: A python based framework for the assessment of laser-modified 3D microstructures for Windows and Raspbian",
abstract = "Biocompatible 3D microstructures created with laser lithography and modified for optimal cell growth with laser grafting, can imitate the 3D structure cells naturally grow in. For the evaluation of the quality and success of those 3D microstructures, specialized software is required. Our software PySpot can load 2D and 3D images and analyze those through image segmentation, edge detection, and surface plots. Additionally, the creation and modification of regions of interest (ROI) allow for the quality evaluation of specific areas in an image by intensity analysis. 3D rendering allows for identifying complex geometrical properties. Furthermore, PySpot is executable on Windows as well as on Raspbian, which makes it flexible to use.",
keywords = "3D microstructures, Bioinformatics, Fluorescence microscopy, Image analysis, Image processing methods, Software development",
author = "Hannah Janout and Bianca Buchegger and Andreas Haghofer and Dominic H{\"o}glinger and Jaroslaw Jacak and Stephan Winkler and Armin Hochreiner",
note = "Publisher Copyright: Copyright {\textcopyright} 2020 by SCITEPRESS - Science and Technology Publications, Lda. All rights reserved. Copyright: Copyright 2020 Elsevier B.V., All rights reserved.; 7th International Conference on Bioimaging, BIOIMAGING 2020 - Part of 13th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2020 ; Conference date: 24-02-2020 Through 26-02-2020",
year = "2020",
language = "English",
volume = "2",
series = "BIOIMAGING 2020 - 7th International Conference on Bioimaging, Proceedings; Part of 13th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2020",
publisher = "SciTePress",
pages = "135--142",
editor = "Filipe Soares and Ana Fred and Hugo Gamboa",
booktitle = "BIOIMAGING 2020 - 7th International Conference on Bioimaging, Proceedings; Part of 13th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2020",
}