PySpot: A python based framework for the assessment of laser-modified 3D microstructures for Windows and Raspbian

Hannah Janout, Bianca Buchegger, Andreas Haghofer, Dominic Höglinger, Jaroslaw Jacak, Stephan Winkler, Armin Hochreiner

Publikation: Beitrag in Buch/Bericht/TagungsbandKonferenzbeitragBegutachtung

Abstract

Biocompatible 3D microstructures created with laser lithography and modified for optimal cell growth with laser grafting, can imitate the 3D structure cells naturally grow in. For the evaluation of the quality and success of those 3D microstructures, specialized software is required. Our software PySpot can load 2D and 3D images and analyze those through image segmentation, edge detection, and surface plots. Additionally, the creation and modification of regions of interest (ROI) allow for the quality evaluation of specific areas in an image by intensity analysis. 3D rendering allows for identifying complex geometrical properties. Furthermore, PySpot is executable on Windows as well as on Raspbian, which makes it flexible to use.

OriginalspracheEnglisch
TitelBIOIMAGING 2020 - 7th International Conference on Bioimaging, Proceedings; Part of 13th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2020
Redakteure/-innenFilipe Soares, Ana Fred, Hugo Gamboa
Herausgeber (Verlag)SciTePress
Seiten135-142
Seitenumfang8
Band2
ISBN (elektronisch)9789897583988
PublikationsstatusVeröffentlicht - 2020
Veranstaltung7th International Conference on Bioimaging, BIOIMAGING 2020 - Part of 13th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2020 - Valletta, Malta
Dauer: 24 Feb 202026 Feb 2020

Publikationsreihe

NameBIOIMAGING 2020 - 7th International Conference on Bioimaging, Proceedings; Part of 13th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2020

Konferenz

Konferenz7th International Conference on Bioimaging, BIOIMAGING 2020 - Part of 13th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2020
Land/GebietMalta
OrtValletta
Zeitraum24.02.202026.02.2020

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