NetBioV: An R package for visualizing large network data in biology and medicine

Shailesh Tripathi; Matthias Dehmer; Frank Emmert-Streib

doi:10.1093/bioinformatics/btu384

NetBioV: An R package for visualizing large network data in biology and medicine

Shailesh Tripathi
, Matthias Dehmer
, Frank Emmert-Streib^*

^*Korrespondierende/r Autor/-in für diese Arbeit

Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung

39 Zitate (Scopus)

Abstract

SUMMARY: NetBioV (Network Biology Visualization) is an R package that allows the visualization of large network data in biology and medicine. The purpose of NetBioV is to enable an organized and reproducible visualization of networks by emphasizing or highlighting specific structural properties that are of biological relevance.

AVAILABILITY AND IMPLEMENTATION: NetBioV is freely available for academic use. The package has been tested for R 2.14.2 under Linux, Windows and Mac OS X. It is available from Bioconductor.

Originalsprache	Englisch
Seiten (von - bis)	2834-2836
Seitenumfang	3
Fachzeitschrift	Bioinformatics
Jahrgang	30
Ausgabenummer	19
DOIs	https://doi.org/10.1093/bioinformatics/btu384
Publikationsstatus	Veröffentlicht - Okt. 2014
Extern publiziert	Ja

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10.1093/bioinformatics/btu384

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title = "NetBioV: An R package for visualizing large network data in biology and medicine",

abstract = "SUMMARY: NetBioV (Network Biology Visualization) is an R package that allows the visualization of large network data in biology and medicine. The purpose of NetBioV is to enable an organized and reproducible visualization of networks by emphasizing or highlighting specific structural properties that are of biological relevance.AVAILABILITY AND IMPLEMENTATION: NetBioV is freely available for academic use. The package has been tested for R 2.14.2 under Linux, Windows and Mac OS X. It is available from Bioconductor.",

keywords = "Algorithms, Arabidopsis/metabolism, Computational Biology/methods, Computer Graphics, Gene Regulatory Networks, Humans, Lymphoma, B-Cell/metabolism, Programming Languages, Reproducibility of Results, Software",

author = "Shailesh Tripathi and Matthias Dehmer and Frank Emmert-Streib",

year = "2014",

month = oct,

doi = "10.1093/bioinformatics/btu384",

language = "English",

volume = "30",

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AU - Tripathi, Shailesh

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N2 - SUMMARY: NetBioV (Network Biology Visualization) is an R package that allows the visualization of large network data in biology and medicine. The purpose of NetBioV is to enable an organized and reproducible visualization of networks by emphasizing or highlighting specific structural properties that are of biological relevance.AVAILABILITY AND IMPLEMENTATION: NetBioV is freely available for academic use. The package has been tested for R 2.14.2 under Linux, Windows and Mac OS X. It is available from Bioconductor.

AB - SUMMARY: NetBioV (Network Biology Visualization) is an R package that allows the visualization of large network data in biology and medicine. The purpose of NetBioV is to enable an organized and reproducible visualization of networks by emphasizing or highlighting specific structural properties that are of biological relevance.AVAILABILITY AND IMPLEMENTATION: NetBioV is freely available for academic use. The package has been tested for R 2.14.2 under Linux, Windows and Mac OS X. It is available from Bioconductor.

KW - Algorithms

KW - Arabidopsis/metabolism

KW - Computational Biology/methods

KW - Computer Graphics

KW - Gene Regulatory Networks

KW - Humans

KW - Lymphoma, B-Cell/metabolism

KW - Programming Languages

KW - Reproducibility of Results

KW - Software

UR - https://www.scopus.com/pages/publications/84911403383

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SP - 2834

EP - 2836

JO - Bioinformatics

JF - Bioinformatics

IS - 19

ER -

NetBioV: An R package for visualizing large network data in biology and medicine

Abstract

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